YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|46097595, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTLPRSLV GIARSSVRAL HSSVATAAST STLSPVAAAH MRPVNGFVGA IGNTPLIRLN  60
   61 KISDETGCEV LGKAEFMEPG GSVKDRAALY VVKDAEERGL IKPGGTVVEG TAGNTGIGLA 120
  121 HVCRSKGYRC VIYMPNTQSQ EKIDLLRMLG AEVHPVPAVA FDNPDNYNHQ AKRHAERLEN 180
  181 AVWTNQFDNT ANRRAHIETT GPEIWDQIDG NLDGFICATG TGGTLAGITS YLKQKSNGKV 240
  241 QCWLADPPGS VLHSYIQTKG KLMDREGGSI TEGIGQGRVT ENLKPDVEKL DNSVHVPDEE 300
  301 SISMVYDLLH EEGIYVGASS ALNVVAAKKM AQQLGPNKTI VTILCDGAYR YQARLFSRKW 360
  361 LESKKLDTAI PEHLQKYIVL P

Type	Start	End	Confidence
Signal Peptide	1	38	0.99
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	381	0.99