YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49070532, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDSLGALLA IVVLWSILRF AFGGGPHNST GGNQAPAINA ARSRPVPQHM VDSIKALFPH  60
   61 IPDASIRYDL QRSGSVEETC ERILNEGGLP SPPAGFFSTA ETSTSPNAAN LGAQNVHRAP 120
  121 TNAAAVRSSS ATSASDKSPN LISRFGLQSR LTSDNQPSML DSHPSSSNQG SSSSWATTPE 180
  181 ERARILKDRK EKMILEARRK MLERQKANLA SETTTPAAST

Type	Start	End	Confidence
Signal Peptide	1	23	0.97
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	220	0.99