YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71005862, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLRSIGPAW FSFSRVVCCN NAKHSTALFR AYATTPSRVK TTYPSSALPA NENSQHHNQE  60
   61 NIGQERDQGY LAFTKSSLFK LTLPLQPPSS DPSSPSSIYS SATAKAERQN ELPRSQAEEA 120
  121 ERKKLSEIPW EQAAETSEPP VSQLNHRSHL NLHGPENGEP SDVEADEYDA DAPAHSVVFL 180
  181 LHSAQPLSYI ANLIRAEGPS PEPSQHQIEA EKQKTVRTES SRYQDDNSGK VSVPAAPRSS 240
  241 PERKDKRVQL SPEQLEMREM LLRQGFVDPL GDPPISFHTR AADGKRWSPA TGIGDFLRDA 300
  301 ARIGSFVIRI GERNVYVTVP SFEDRTRFLR ASLYAKTEQI EKLVHLKVEC DRIAHSGTKR 360
  361 LSFAGVLILS AWWGSVAFLT FFTELGWDVM EPVTYLTGLG TILGGYIWFL IHNREVSYRA 420
  421 VLNETTSRRQ QKLYIEKGFN IERYQELIEE VKDLRKTIKK VAEDYDLEWD QGETKAGKQN 480
  481 KSALKIIRKH EEASFRSKRE NVREDEEGDA DEKDSGRTAT ASHEAEDKDG DGQPDNVQHD 540
  541 HSKLKVRKKK ANGSEARRHF STIARRSGAD ANPSPFARHY SSSSESGKRP ARGVDSPNES 600
  601 FRASNGATPL LDGGATHVTQ TALPRTKRRF NFQPYVALSR IDKPIGTWLL YWPCGWSIVL 660
  661 ASHTMGLSYT TPLFYTMLFG VGAFVMRGAG CTINDMWDAK MDRMVERTKA RPLAAGEITH 720
  721 FQALCFLGIQ LSAGLAVLVN LNLYSIMLGA SSLGVVVLYP LMKRVTYWPQ LVLGFAFNWG 780
  781 AMLGWSAVAG AVDWGVVLPL YAGSILWTLV YDTIYAHQDK VDDVHAGVKS TALLFGDKTK 840
  841 PVLSAFSAGT IGLFGYSASQ AIPPAIGAGA SAVDVLRPAQ SSSIGELIFS PSFLDTVSAT 900
  901 SPILDSLAHH HPLFCVALAG AAGHLAWQIR TVKLDDRGDC WRKFCSNTTF GWIVVCGLIA 960
  961 DYASWLYLDS QHGKLEQARD SDVI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle