YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49068996, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFARSLSRA VARAPSSSSL VTPSHRVAGF HSTPKASRII ASQPLRAKEA ATPLDAAKGY  60
   61 PVIDHEYDAI VVGAGGSGLR AAFGLAEAGL NTACITKLFP TRSHTVAAQG GINAALGNMT 120
  121 EDDWRWHMYD TVKGSDWLGD QDAIHYMCRE APRTVIELEH FGLPFSRTKD GKIYQRAFGG 180
  181 QSLNYGKGGQ AYRCAAAADR TGHAMLHTLY GQSLRHNTNF FIEYFALDLI MEDGECVGVT 240
  241 ALNMEDGTIH RFRAHKTVLA TGGYGRAYFS ATSAHTCTGD GMAMVSRAGL PLQDLEFVQF 300
  301 HPTGIYGAGC LITEGSRGEG GYLLNSEGER FMERYAPTAK DLASRDVVSR SMTIEIREGR 360
  361 GVGPEKDHIY LQLSHLPPEV LHERLPGISE TAAIFAGVDV TKEPIPVLPT VHYNMGGIPT 420
  421 KYTGEVITKG PNGEDKIVPG LYAAGETACV SVHGANRLGA NSLLDIVVFG RACANHIKEN 480
  481 LDPGKPHKEL KGDAGAKSIN DLDWVRNANG TKTTADIRND MQRVMQSDAA VFRTQKTLDE 540
  541 GVEKIDKVYS TFPDVSIQDR SMIWNSDLVE TLELKNLLTC ATQTMHSAAA RKESRGAHAR 600
  601 EDYPDRDDEQ WMRHTLSWQH EGTGDKVKLD YRGVISTTLD EAECKPVPPF KRQY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle