YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPN3_USTMA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRYAVLVSG PAGSGKSTFC SALIAHAQSL GRNVHLFNLD PAAERFEYQP SIDIKELISL  60
   61 EDVMEEMNLG PNGGLIYCFE YLLDNLDWLD DELGQFNDDY IIIDCPGQIE LYTHFPIMSR 120
  121 LVNILSSQYH FRICATYLLE SQFIDDKTKY FAGVLSAMSA MINLEVPHIN LLSKMDLVEK 180
  181 GEIGSEAKRG RKREMERYLD PDPLLLMDEV NSRTNPKFHS LNQALVQLID DFSMVSFMPL 240
  241 DSTDEDSVGT ILSHIDNAVQ YGEDEEPKEP KDMDEGDFTA Q

Type	Start	End	Confidence
Signal Peptide	1	22	0.73
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	281	0.99