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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71005012, gi|...
Protein type: Transmembrane
Type Confidence: 0.69
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPYDSTHPS RPALARKRTS EREPTEKPAL DPESPSDSQD GKGRTRARIN MACIHCRHRK  60
   61 IKCDGSQPAC ATCVRLRREC EYEPVTEYEN LMSRERKRRN KEKKAARMAS LGIFAGHSPL 120
  121 SMLHPTTTLG MPSSSLHHYS DLSQPSLTPL FLSTTDEGQD VESQFGPRRR RGISDTRAAT 180
  181 LQHRLGAMTS QILEPAVQQA SVSQPHTPVQ AHRFFESLAS LPVQHEIPSA ATEYYSGPLS 240
  241 APLMPPASSA PFSALPTPTT STALSYHEQM TTSHQILDLM GLGSSSSMPT LPSGRVSANE 300
  301 ADLDLGIVDM SGVPTVVPTS AHVRPVDLPA PHGHFDFASV PFPTLETFSL ELPFASLRRR 360
  361 SSIHLPVGTA DAFRRPSVAE IATAALMQKV AVKRAEKFNT KQLADELLTP DTTGIVAWNA 420
  421 HVQSQMPAFL DSWSGFHHAS DVISSQPAST SDYVNPDVTA GRSNSEGLVS LGPLSPPSVL 480
  481 ASGLVNVGNE PVTEEVSTAS SCSTADTASL NAETSRLEHS YFAGATVKGG QASREISPFA 540
  541 LSPLSANSSA GNHSSLLPQG DWSSSVPLLS PVTELNNTFH SFNIFPTATS AADYPHQFKT 600
  601 EDDGPLSMAF HPNF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle