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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46096360, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVERDEYMRE GFDPKSLTMP QLRSILVEHE VPFSSAARKA DLVDHFNQNV LPKTASLRKK  60
   61 NASIVASSSG IIDMRDQTTT HQTPAKRKPG RPRKSEAPTP SAMPSKTPVK ARTPRKKSSL 120
  121 SHKFATSTES EDKDNVKGNK SEPDVAEVPV KRKPGRPRKT APVVVSNPIE ISDTDDNEDN 180
  181 ISPRHVSFDP KTSPPVSGAR KAGRLSLGAR SDDDGTFSDS NPFQSGSEAS PATGIAAKAG 240
  241 AYARKARRQT TDGSTLRGKT SAPSLAPESP PKQLKQTSPS VASTLRNYMD QAVASTTPPR 300
  301 IISRLTGTKS ADSTGGHAAD DEGTARHSKS TSVDAVDDAD DDSFDLETFT SPSALAKVRN 360
  361 LRHKKDQQRS REQRSAKSFI DYLLKSVLVF VAVGVLAWTV WYARETRALG FCDTDSNTNS 420
  421 IVEDRRLTAL AFAQANNETL DDLTIFPDRL QPACTPCPPH ANCAYGKVLG CTSDDWVLQP 480
  481 SIRSNIPLAN AFLPLGMTIP RCYPDTQKLV LASELAQAIS HMLADFKGEV ICGTQKTHAT 540
  541 VRSLPKKLVA FESNLTYAIS EGAVKRSMSA TRDTMLDEEY FEQIWYMALF ELTDPRSNVV 600
  601 RIPIANGTVG EGAEQGTRYF LAAKQASLSL SCRSRLALKG WMLRARLYFG LLLSSVLGFF 660
  661 YLRYRLAAAR RENVKVSLLV QTALEKLQEQ EYLHGRDPVL HPDDFIPLSH LRDDILREEH 720
  721 HSAARSRLWK KVAKVVEENS NVRTRQAQKK GEWLRVWQWI GMDGFRGYGT PSGGIEGKAN 780
  781 ADDDADARMP VA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle