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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|46096024, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDTYYSQPP QRHRALDTPL GHPAHQTHHQ QQHASAYSST QSNMLASHHD GLDYTHFHAP  60
   61 STTHMLQPYY DPYSSSSPAN DSMRPSFSNS HSFLRNDSSV YSAKLMHKTP SDDAHELSLR 120
  121 ATHFPYAKDE NGRIGIGRGH HIEATDGILP DMPPDMDRLN PEQKQIMKQF PPDLDDLDGG 180
  181 KSGLQAVKDL LKDWKSWFKL KYLHWWVMLI VVIAIVVLTT IYHEQIVDWL TPISKKVTTV 240
  241 AWGWIIPVAI LFIISFPPLF GHEIVLILVG LVYGIWIGFG IASLGTLLGE IGNFYAFKHC 300
  301 LRSMAANYER KNIHYACMAE MVRDGGFWVM FLARLSAIPG HFTTAVFATV GMNIFVFTFA 360
  361 AVLALPKQLL IVYLGVAIKN SGDGTEDTKS KIIKYVVLVI SFIITVWTAY WLYKKMEKVR 420
  421 PTVSARLRQK RYELLLQART PGTEAYSGQR LHTYPPNGGV YTGQSGQSGQ TTSALDASYA 480
  481 YRYGGGADEY YAGYGGGDVS EDTYNEPGYR QMHASHARPP VSGQASYAAA QPAPPAPPAP 540
  541 PVVEQEYPPA QTTAQAGREP IAAPMQFHRP IRQNSGAVQE RRSPFRDPRA PSSRTDACRR 600
  601 PTLTQYASAP GARARHEGRA DEASALTKPD EWASTSSTAT SPVEGAPPEY TSFVGSTHSH 660
  661 ANTSAPNEQR TATMAARVDA SVQRYHLSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle