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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49067332, gi|...
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.23
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRLSDLVWL GGLPSLLVLV TWRTVSCPYT KVEESFTIQA VHDIVSYGVR PAALARYDHR  60
   61 VFPGAVPRSF IGPLLLAAIS YPFLLLSRFL GAVQTSADAQ VVVRLCLASA NVSAVNFFCQ 120
  121 QTFKSTMPPA KQNSFSRLRD EQLVALLFML VTAIQFHFAF WASRTIPNSL ALPLVTTALA 180
  181 LVCRNVGVLY QGKDRALVDA KVAIWLLTFS GVVLRLEIVA TLVPVGLYLL VTRRISFWAG 240
  241 LKTGIVSGTF SILLTTVIDT YFWQDLAHAN VKSLLSIYAL SLRNLTSGDR PKPLWPELHA 300
  301 LLFNVVQGKS SEWGVSPWHA YITSLIPRLL AFTGPLVVIG AAQLLRGRNS ALEARARFLF 360
  361 LTAVMHIAVL SLLGHKEWRF AFYTLPALNV VASIGASKLA RSWPGRAVLA ILLLLQLGLS 420
  421 WFTGYVSSIN YPGGNALRTL HQHIDADLQR EPNGQVIVHI DVLPAMTGVT LFQSIHLNRI 480
  481 FQQSRLDSFR KVSPAPCGTQ ECWVYDKTEN LPVSGHEATQ AWSTFTHLIT ETPECAMLQD 540
  541 QQGRALNESE QLFEQIAPPI TSFVGLRRKS FSQLTTDLLN TPLAAASILG LTSSSSQHSA 600
  601 GSLLRSALPV VVVEQPTSQS ELRRQGKHEK ARAKMMEDFE RQKADLVKES ERNRTGADRF 660
  661 VGKNDSMEDA LKKSTIGLVH LEDFQKLRSE LEEEKKREAA RTNELKAHDK ATKKNKQVKK 720
  721 ERAKLSFAYD DEEEQGGAGP SIPKLETSAK RKRRSDDNAV DGDNVDQLDK DLSPLTKKTS 780
  781 LKNPNVDTSF LPDRDREEAQ RRMREELRQE WLRKQEELKQ EDVEITYSYW DGTGHRKTVL 840
  841 CKKGDTIAHF LEKCRQQVSE LRGVSVDSMM YIKEDLIIPH HYSFYDFIVN KARGKSGPLF 900
  901 NFDVHDDIRL VADASVEKDE SHAGKVVERT FYNRNKHVWP YSRWEVYDPK KDYGNYTIHD 960
  961 RKNLVEYFPS ILLESFASIV KVGLLDADVV RIPRRDGKNG NPTLSKALAK LEQDANQMKL1020
 1021 HWSSDAERSP WSINSMAIIF SLGNGGFKLS LEVVPATLY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle