YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71004398, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.37
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEPYEEKAS RGGRGVEFCC LFYPLVKVGA YLIPLEFAFV SGCIIVLSTT TPTIVAAVDT  60
   61 LPRIFTLILL IFSIVTLAWQ IIGLITVGVE MSSIYRLYIR VNLLLVLLLT TVASIGTAVI 120
  121 ATKHKQSQEV CTRIYGNPPL NSSTGVPFDA FDSFAPGKQI CNYFMWAQVG GMVGLVVILS 180
  181 ATQLYFCYCQ PFGYLTPGEL LQRDDVQQSR NGGNNNHDYD SAVCLVRRLS AASKLVAAPS 240
  241 IIRDSQLPLR VRSAVSDLGL KVLTQSHRSN RSSPSHRHTY CTSCRELHRQ STLLINCNHN 300
  301 PNAARPHINQ RHLSYIGFYR HCSADRIATA SRLCHHTLYK TSGLVARSAA RSAKSLNNVA 360
  361 KVACATPSQA RGLATVTDTP VRSYGGLRDQ DRIFQNAYMR HDHGLKGAKA RGDWHRTKDI 420
  421 LLKGHDWIIS QMKESGMRGR GGAGFPSGLK WSFMNKPGWE KDPRPRYLVI NADEGEPGTC 480
  481 KDREIMRGDP HKLIEGCLVA GRAMNANAAY IYVRGEFYLE VAHLQHAIKE AYADGLIGKN 540
  541 ACGSGYDFDV YVHKGAGAYI CGEETALIES LEGKQGKPRL KPPFPADVGV FGCPTTVANV 600
  601 ETVAAAPTII RRGPSWFAGF GRDKNQGTKL FAISGHVNNP CVVEEEMSIP LQELIERHCG 660
  661 GVRGGWDNLL GIVPGGSSVP ILPKHKCEQV LMDFDSLREN QSSLGTGAVI VMDKTTDVVQ 720
  721 AISRFAKFYK HESCGQCTPC REGTTWLANM MERFEEGRGN NREIDMIYEL TKQMEGHTIC 780
  781 ALADAAAWPI QGLLRWFRPE IEERMRLYQE KNGPVLVGGR RLKDMDPDYA FPANMGTPLS 840
  841 PKALSQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle