YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71004210, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.35
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRSTRNSKS TAAHVAAANG TAGGKTESLL HRANNADENV FLFVPNLIGY ARVILAALSL  60
   61 YFMKGNPKVC TLLYGVSCLL DAFDGMAARA LGQSTKFGAV LDMVTDRCTT ACLLCFLTAA 120
  121 YPRCAVIFQG LITLDFSSHY IHMYSSLVTG SASHKIVTSD VSKILWYYYN DSRTLFMFCA 180
  181 GNELFFVCLY LMDFYKRPFG LDIEPLLFLV PSALKASPWM AFIIKETPKL SWPQIVGAIT 240
  241 FPICAAKQII NCVQFWKAAK VLVGKDLEER QKARSKAL

Type	Start	End	Confidence
Signal Peptide	1	23	0.41
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	278	0.58