YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71004454, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLLELRASA ITTFPRNFAA TIHSIVSALR PTSTPCSACI VAPSLHHFFP TLQQHKLTTR  60
   61 LAPPHHDHDH FSSLQVVKTF ELQSKSKTDL TKQLEELKTE LLNLRVQKVA GGSSSKILRI 120
  121 NSLRKDIARV LTVMNQKQRA NLREFYKGKS QIPLDLRAKK TRAIRRKLNQ QRFAMRSQRV 180
  181 TSLLHTVLLL RFHERTRITE RQHKREIHFA NRKYVLKA

Type	Start	End	Confidence
Signal Peptide	1	38	0.61
N-region	1	29
H-region	30	35
C-region	36	38
Cleavage Site	38	39
Non-Cytoplasmic	39	218	0.99