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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|30047775
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PASAVPTAGL RATRPQRASH MEAPEEPAPV RGGPEATLEV RGSRCLRLSA FREELRALLV  60
   61 LAGPAFLVQL MVFLISFISS VFCGHLGKLE LDAVTLAIAV INVTGVSVGF GLSSACDTLI 120
  121 SQTYGSQNLK HVGVILQRSA LVLLLCCFPC WALFLNTQHI LLLFRQDPDV SRLTQTYVTI 180
  181 FIPALPATFL YMLQVKYLLN QGIVLPQIVT GVAANLVNAL ANYLFLHQLH LGVIGSALAN 240
  241 LISQYTLALL LFLYILGKKL HQATWGGWSL ECLQDWASFL RLAIPSMLML CMEWWAYEVG 300
  301 SFLSGILGMV ELGAQSIVYE LAIIVYMVPA GFSVAASVRV GNALGAGDME QARKSSTVSL 360
  361 LITVLFAVAF SVLLLSCKDH VGYIFTTDRD IINLVAQVVP IYAVSHLFEA LACTSGGVLR 420
  421 GSGNQKVGAI VNTIGYYVVG LPIGIALMFA TTLGVMGLWS GIIICTVFQA VCFLGFIIQL 480
  481 NWKKACQQAQ VHANLKVNNV PRSGNSALPQ DPLHPGCPEN LEGILTNDVG KTGEPQSDQQ 540
  541 MRQEEPLPEH PQDGAKLSRK QLVLRRGLLL LGVFLILLAG VRWCDHSSLQ PRTLGLQAIL 600
  601 LCQPPE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle