YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28502901
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KDRTQELRTA KDSDDDDDVT VTVDRDRFMD EFFEQVEEIR GFIDKIAENV EEVKRKHSAI  60
   61 LASPNPDEKT KEELEELMSD IKKTANKVRS KLKSIEQSIE QEEGLNRSSA DLRIRKTQHS 120
  121 TLSRKFVEVM SEYNATQSDY RERCKGRIQR QLEITGRTTT SEELEDMLES GNPAIFASGI 180
  181 IMDSSISKQA LSEIETRHSE IIKLETSIRE LHDMFMDMAM LVESQGEMID RIEYNVEHAV 240
  241 DYVERAVSDT KKAVKYQSKA RRKKIMIIIC CVILGIIIAS TIGGIFG

Type	Start	End	Confidence
Cytoplasmic	1	264	0.98
Transmembrane Helix	265	286	0.94
Non-Cytoplasmic	287	287	0.99