YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14198191
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TAAPKVLLLS GQPASGGRAL PLMVPGPRAA GSEASGTPQA RKRQRLTHLS PEEKALRRKL  60
   61 KNRVAAQTAR DRKKARMSEL EQQVVDLEEE NHKLQLENQL LREKTHGLVV ENQELRTRLG 120
  121 MDTLDPDEVP EVEAKGSGVR LVAGSAESAA LRLCAPLQQV QAQLSPPQNI FPWTLTLLPL 180
  181 QILSLISFWA FWTSWTLSCF SNVLPQSLLV WRNSQRSTQK DLVPYQPPFL CQWGPHQPSW 240
  241 KPLMNSFVLT MYTPSL

Type	Start	End	Confidence
Non-Cytoplasmic	1	169	0.54
Transmembrane Helix	170	195	0.70
Cytoplasmic	196	256	0.48