YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	P4H12_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACLSRIFLI LMITMSSSSP PFCSGGSRKE LRDKEITSKS DDTQASYVLG SKFVDPTRVL  60
   61 QLSWLPRVFL YRGFLSEEEC DHLISLRKET TEVYSVDADG KTQLDPVVAG IEEKVSAWTF 120
  121 LPGENGGSIK VRSYTSEKSG KKLDYFGEEP SSVLHESLLA TVVLYLSNTT QGGELLFPNS 180
  181 EMKPKNSCLE GGNILRPVKG NAILFFTRLL NASLDGKSTH LRCPVVKGEL LVATKLIYAK 240
  241 KQARIEESGE CSDEDENCGR WAKLGECKKN PVYMIGSPDY YGTCRKSCNA C

Type	Start	End	Confidence
Signal Peptide	1	25	0.98
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	291	0.99