YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PRL_NEOVI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNKGWSLKG SLLPLLLLVS DLLLCQGVTS LPICPTGAVN CQVSLRDLFD RAVILSHYIH  60
   61 NLSSEMFNEF DKRYAQGRGF ITKAINSCHT SSLSTPEDKE QAQQIHHEDL LNLILRVLRS 120
  121 WNDPLYHLVS EVRGMQEAPD SILSRAIEIE EQNRRLLEGM EKIVGQVHPG VRENEVYSVW 180
  181 SGLPSLQMAD EDSRLFAFYN LLHCLRRDSH KIDNYLKLLK CRIVYDSNC

Type	Start	End	Confidence
Signal Peptide	1	27	0.97
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	229	0.99