YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CP21B_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAITATRLVS LTLLWIVVLF VTLALIQIKL TDVADPSVNE KILDAKLNQV GEDLEGVTHK  60
   61 VYFDIQINGS PAGRILIGLF GNIVPKTAEN FRSLCTGEKG VGNMGKPLYF KGSSFHRIIP 120
  121 GFMIQGGDFT RGDGRGGESI YGDKFADENF KLKHTGPGFL SMANSGPDSN GSQFFITTVT 180
  181 TSWLDGHHVV FGKVLSGMEV VRKIEAQGQD SGVPKANVII FASGEVSL

Type	Start	End	Confidence
Signal Peptide	1	24	0.97
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	228	0.99