YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KCR1_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEICTYFKSQ PTWLLILFVL GSISIFKFIF TLLRSFYIYF LRPSKNLRRY GSWAIITGPT  60
   61 DGIGKAFAFQ LAQKGLNLIL VARNPDKLKD VSDSIRSKYS QTQILTVVMD FSGDIDEGVK 120
  121 RIKESIEGLD VGILINNAGM SYPYAKYFHE VDEELINNLI KINVEGTTKV TQAVLPNMLK 180
  181 RKKGAIINMG SGAAALIPSY PFYSVYAGAK TYVDQFTKCL HVEYKKSGID VQCQVPLYVA 240
  241 TKMTKIRRAS FLVASPEGYA KAALRFVGYE AQCTPYWPHA LMGAVVSALP ESVFESFNIK 300
  301 RCLQIRKKGL QKDSMKKE

Type	Start	End	Confidence
Cytoplasmic	1	11	0.44
Transmembrane Helix	12	38	0.80
Non-Cytoplasmic	39	318	0.62