YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21593575
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLWIVSVLV LTHLVHGALC WGKDGHYTVC KLAEGFFEDD TIAAVKKLLP ESVDGGGLAD  60
   61 FCSWPDEIKK LSQWQWTSTL HYVNTPEYRC NYEYCRDCHD THKHRDWCVT GAIFNYTNQL 120
  121 MSASENSQNI VHYNLTEALL FLSHYMGDVH QPLHTGFLGD LGGNTIIVNW YHNKSNLHHV 180
  181 WDNMIIDSAL ETYYNSSLPH MIQALQAKLK NGWSNDVPSW KSCHFHQKAC PNLYASESID 240
  241 LACKYAYRNA TPGTTLGDEY FLSRLPVVEK RLAQGGIRLA ATLNRIFSAK PKLAGL

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	296	0.99