YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21593530
Protein type:	Globular with Signal Peptide
Type Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPFMSGLRA VSSLLSCRNA ISRKLVSRSG ISRGSFVSDQ IRRFGSLSGV ERCSSNWLMS  60
   61 NDDARVSFRR LPGSVSLLQR RHFLGCGDGE EGGGELSKIY EERRVLGYTP EQMFNVVAAV 120
  121 DLYHGFVPWC QRSEVLKEYP DGSFDAELEI GFKFLVESYI SHVESERPKW IKTTARDTGL 180
  181 FDHLINLWQF KPGPIPGTCD LHFHVDFKFN SPLYRQVASM FFKEVASRLV GAFSDRCRLV 240
  241 YGPGVRVDEN AYEQRA

Type	Start	End	Confidence
Signal Peptide	1	22	0.71
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	256	0.99