YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21593501
Protein type:	Globular with Signal Peptide
Type Confidence:	0.57
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISFRTLAL LTLSVLLISI SLGVVTATES QRNEGGVLTM YEQWLVENGK NYNGLGEKER  60
   61 RFKIFKDNLK RIEEHNSDPN RSYERGLNKF SDLTADEFQA SYLGGKMEKK SLSDVAERYQ 120
  121 YKEGDVLPDE VDWRERGAVV PRVKRQGECG SCWAFAATGA VEGINQITTG ELVSLSEQEL 180
  181 IDCDRGNDNF GCAGGGAVWA FEFIKENGGI VSDEVYGYTG EDTAACKAIE MKTTRVVTIN 240
  241 GHEVVPVNDE MSLKKAVAYQ PISVMISAAN MSDYKSGVYK GACSNLWGDH NVLIVGYGTS 300
  301 SDEGDYWLIR NSWGPEWGEG GYLRLQRNFH EPTGKCAVAV APVYPIKSNS SSHLLSPSVF 360
  361 KLVVLFVFQL ISLALL

Type	Start	End	Confidence
Signal Peptide	1	27	0.97
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	376	0.97