YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21593352
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLKATELCL GLPGGAEAVE SPAKSAVGSK RGFSETVDLM LNLQSNKEGS VDLKNVSAVP  60
   61 KEKTTLKDPS KPPAKAQVVG WPPVRNYRKN MMTQQKTSSG AEEASSEKAG NFGGGAAGAG 120
  121 LVKVSMDGAP YLRKVDLKMY KSYQDLSDAL AKMFSSFTMG NYGAQGMIDF MNESKLMNLL 180
  181 NSSEYVPSYE DKDGDWMLVG DVPWEMFVES CKRLRIMKGS EAIGLAPRAM EKYCKNRS

Type	Start	End	Confidence
Signal Peptide	1	18	0.81
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	238	0.99