YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	P4H4_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARRGLLISF FAIFSVLLQS STSLISSSSV FVNPSKVKQV SSKPRAFVYE GFLTELECDH  60
   61 MVSLAKASLK RSAVADNDSG ESKFSEVRTS SGTFISKGKD PIVSGIEDKI STWTFLPKEN 120
  121 GEDIQVLRYE HGQKYDAHFD YFHDKVNIVR GGHRMATILM YLSNVTKGGE TVFPDAEIPS 180
  181 RRVLSENKED LSDCAKRGIA VKPRKGDALL FFNLHPDAIP DPLSLHGGCP VIEGEKWSAT 240
  241 KWIHVDSFDR IVTPSGNCTD MNESCERWAV LGECTKNPEY MVGTTELPGY CRRSCKAC

Type	Start	End	Confidence
Signal Peptide	1	27	0.93
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	298	0.99