YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21593234
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLDSLVIF LFSTLFVTIV SSETPCRNFK SIISFGDSIA DTGNLVGLSD RNQLPVTAFP  60
   61 PYGETFFHHP TGRSCDGRII MDFIAEFVGL PYVPPYFGSK NRNFDKGVNF AVAGATALKS 120
  121 SFLKKRGIQP HTNVSLRVQL KSFKKSLPNL CGSPSDCRDM IGNALILMGE IGGNDYNFPF 180
  181 FNRKPVKEVE ELVPFVIASI SSTITELIGM GGKTFLVPGE FPIGCSVVYL TLYKTSNKDE 240
  241 YDPTTGCLKW LNKFGEYHSE KLKAELNRLR KLYPHVNIIY ADYYNSLLRI FKEPAKFGFM 300
  301 DRPFPACCGI GGPYNFNFTR KCGSVGVKSC KDPSKYVGWD GVHMTEAAYK WIADGILNGP 360
  361 YANPPFDRSC LRSEIKKESL YNQSTLTQAC VKL

Type	Start	End	Confidence
Signal Peptide	1	22	0.99
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	393	0.99