YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|11358871, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDLLSGSFK TSVADGSSPP HSHNIEMSKA KVSGGSCHGG NNLDTFFLDV EVVNEDLKEL  60
   61 DRLCHNLRSS NEQSKTLHNA NAVKELKKKM DADVTAALKT ARRLKGNLEA LDRANEVNRS 120
  121 LPESGPGSSS DRQRTSVVNG LRKKLKDEME KFSRVRETIT NEYKETVGRM CFTVTGEYPD 180
  181 EATLERLIST GESETFLQKA IQEQGRGRIL DTISEIQERH DAVKDIEKSL NELHQVFLDM 240
  241 AVLVEHQGAQ LDDIEGNVKR ANSLVRSGAD RLVKARFYQK NTRKWTCFAI LLLLIIVVLI 300
  301 VVFTVKPWES NGGGGGGAPR QATPVQAQPP PPPAVNRRLL R

Type	Start	End	Confidence
Cytoplasmic	1	284	0.93
Transmembrane Helix	285	305	0.95
Non-Cytoplasmic	306	341	0.91