YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17933297, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.59
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRAQLILLG LPIFLFCSDL FNLFTPPPPK PQPHRPHQPP HIPHQHRPNA IIPETLDFPS  60
   61 QKTSGLGGAI GYGNTVEINF CVSCSYKGTA VTMKKMLETA FPGLDVILAN YPPPAPKRLL 120
  121 AKVVPVVQMG VIGMIVAGDR ILPMIGITNP PAWFHSLRAN RFGSMASTWL IGNFLQSYLQ 180
  181 SSGAFEVHCN GEPVFSKLKE GRFPGEIELR DLISKTLTRP SILTGSSY

Type	Start	End	Confidence
Cytoplasmic	1	6	0.43
Transmembrane Helix	7	23	0.49
Non-Cytoplasmic	24	228	0.79