YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|26451456, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVLRILSRV TRNAGIRSSL SAVTLPARNQ TPVFSSRFHS LAHDFSHKLV PAQMSMMDSF  60
   61 ALQRFNFSSS TSPESDEKKT HTEASKTSEE KPTAEANQPG LDSESKDSVT DSAKRKRKGA 120
  121 KGAASSSSES DSESDDDELS ADDLVKLVAE KEELLSEKEE EIKQLKDKVL RTYAEMENVM 180
  181 DRTRRDAENT KKYAVQNFAK SLLDVADNLG RASSVVKESF SKLDTSEDSA GAAPLLKTLL 240
  241 EGVEMTEKQL AEVFKKFGME KYDPINEPFD PNRHNAVFQV PDASKPEGTV AHVLKSGYTL 300
  301 YDRVIRPAEV GVTQGGENQE EKKESDA

Type	Start	End	Confidence
Signal Peptide	1	35	0.78
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	327	0.99