YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PAE7_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRLKQCWSS LLVLAVLVIG TGAVPITYLQ SAVAKGAVCL DGSAPAYHFD KGFGSGVNNW  60
   61 IVHMEGGGWC TDVASCNERK GTMKGSSKFM NKDFGFSGIL GGKQSTNPDF YNWNRIKVRY 120
  121 CDGSSFTGNV EAVNPANKLF FRGARVWRAV VDDLMAKGMK NAQNAILSGC SAGALAAILH 180
  181 CDTFRAILPR TASVKCVSDA GYFIHGKDIT GGSYIQSYYS KVVALHGSAK SLPVSCTSKM 240
  241 KPELCFFPQY VVPSMRTPLF VINAAFDSWQ IKNVLAPTAV DKGKEWKNCK LDLKKCSAAQ 300
  301 LKTVQGFRDQ MMRALSPVHS TPSRGLFLDS CHAHCQGGSA ASWSGDKGPQ VANTRIAKAV 360
  361 GNWFYGRSAF QKIDCPSPTC NPTCPAISTE D

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	391	0.99