YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21592900
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIEEIEAVL EKIWDLHDKL SDEIHLISKS HFLKSVKPSN RSEKRKNPHG NSGEDKRPGY  60
   61 VFIKGFAVDD NDSTIQEAKS LNAIRTALEN LEDQLEFFHT IHTQQRTEKD VAIARLEQSR 120
  121 ILLAMRLAEH HGKNYGVLEE ALAFVGSIKS TSHYVSPDHL YDSSRNPDGA NSTPYGIKSN 180
  181 FVINSFASTF GFAKRALGFN HVKGVLGNAA IFTISVVAML HLHQVATSEH HLQKKEDRFY 240
  241 RSQQRKTYGR DKSSGDRSLD HLDVMMARG

Type	Start	End	Confidence
Cytoplasmic	1	203	0.58
Transmembrane Helix	204	223	0.63
Non-Cytoplasmic	224	269	0.89