YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21592895
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSQQAAISF LTNLAKAAFG LGVAATALNS SLYTVDGGER AVLFDRFRGV LDQTVGEGTH  60
   61 FLIPYLQTPH IYDIRTKPHT FSSKSGTKDL QMVNLTLRVL FRPEVSRLPY IFQTLGLEYD 120
  121 EKVLPSIGNE VLKAVVANFN ADQLLTERPQ VSALVREALI KRAREFNIEL DDIAITHLSY 180
  181 GAEFSRAVEA KQVAQQEAER SKFVVMKADQ ERRAAVIRAE GESEAAQLIS DATAKAGMGL 240
  241 IELRRIEASR EVAATLARSP NVAYLPGGQS MLFNLNPGR

Type	Start	End	Confidence
Signal Peptide	1	17	0.84
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	279	0.96