YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21592878
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATRVLTAA TAVTQTTSCF LAKQAFTLPA KKSCGGFGGL CFSRRALVLK SKRPFSCSAI  60
   61 YNPQVKVQEE GPAESLDYRV FFLDGSGKKV SPWHDIPLTL GDGVFNFIVE IPKESKAKME 120
  121 VATDEDFTPI KQDTKKGKLR YYPYNINWNY GLLPQTWEDP SHANSEVEGC FGDNDPVDVV 180
  181 EIGETQRKIG DILNIKPLAA LAMIDEGELD WKIVAISLDD PKAHLVNDVE DVEKHFPGTL 240
  241 TAIRDWFRDY KIPDGKPANR FGLGDKPANR DYALKIIQET NESWAKLVKR SVDAGDLSLY 300
  301

Type	Start	End	Confidence
Signal Peptide	1	21	0.93
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	300	0.99