YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BZR1_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSDGATSTS AAAAAAAAAA ARRKPSWRER ENNRRRERRR RAVAAKIYTG LRAQGDYNLP  60
   61 KHCDNNEVLK ALCVEAGWVV EEDGTTYRKG CKPLPGEIAG TSSRVTPYSS QNQSPLSSAF 120
  121 QSPIPSYQVS PSSSSFPSPS RGEPNNNMSS TFFPFLRNGG IPSSLPSLRI SNSCPVTPPV 180
  181 SSPTSKNPKP LPNWESIAKQ SMAIAKQSMA SFNYPFYAVS APASPTHRHQ FHTPATIPEC 240
  241 DESDSSTVDS GHWISFQKFA QQQPFSASMV PTSPTFNLVK PAPQQMSPNT AAFQEIGQSS 300
  301 EFKFENSQVK PWEGERIHDV GMEDLELTLG NGKARG

Type	Start	End	Confidence
Signal Peptide	1	20	0.98
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	336	0.99