YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21592797
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMMLLQIPP SSSLLNTRNL QIRFFHSSVS ASSKKFRCRA VREKAEDIDK NISPPSSSPP  60
   61 PPSAEEVTKK YGLEVGLWKI LSSKDDEGSD GDNKKKKSKT DEAKELLAKY GGAYLVTSIT 120
  121 LSLISFSLCY VLVTSGVDVQ ALLLKVGIST NETGEKVGAF ALAYAAHKAA SPIRFPPTVA 180
  181 LTPIVANWIG KKVDKEKDDD K

Type	Start	End	Confidence
Cytoplasmic	1	111	0.63
Transmembrane Helix	112	134	0.59
Non-Cytoplasmic	135	201	0.89