YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PAP8_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATASSLTI ASSFSEPRTQ IHSSRRLNLP LQYSIPYKVL RSRSRRLGLV VSSVSAPNVE  60
   61 LRTGPDDLIS TLLSKVANSD GGVTLSPEQH KEVAQVAGEL QKYCVKEPVK NPLIFGDWEV 120
  121 VYCSRPTSPG GGYRSVIGRL FFKTKEMIQA IDAPDIVRNK VSINAFGFLD GDVSLTGKLK 180
  181 ALDSEWVQVI FEPPEIKVGS LEFKYGFESE VKLRITYVDE KLRLGLGSKG SLFVFRRRQ

Type	Start	End	Confidence
Signal Peptide	1	15	0.72
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	239	0.99