YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21592588
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVASSTTL ISSPSSRVFP AKSSLSSPSV SFLRTLSSPS ASASLRSGFA RRSSLSSTSR  60
   61 RSFAVKAQAD DLPLVGNKAP DFEAEAVFDQ EFIKVKLSDY IGKKYVILFF YPLDFTFVCP 120
  121 TEITAFSDRH SEFEKLNTEV LGVSVDSVFS HLAWVQTDRK SGGLGDLNYP LISYFTKSIS 180
  181 KSFGVLIHDQ GIALRGLFII DKEGVIQHST INNLGIGQSV DETMRTLQAL QYIQENPDEV 240
  241 CPAGWKPGEK SMKPDPKLSK EYFSAI

Type	Start	End	Confidence
Signal Peptide	1	43	0.90
N-region	1	34
H-region	35	40
C-region	41	43
Cleavage Site	43	44
Non-Cytoplasmic	44	266	0.99