YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21555237
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARLLFRLLQ EANSTSPAEA SPPFNSDLVL ILAVLLCALT CIIGLIAVSR CAWLRRIASR  60
   61 NRSDQTHPPP VAAANKGLKK KVLRSLPKLT YSPDSPPAEK LVECAICLTE FAAGDELRVL 120
  121 PQCGHGFHVS CIDTWLGSHS SCPSCRQILV VTRCHKCGGL PGSSSSGPEP DTRIKQREDG 180
  181 PDNFLP

Type	Start	End	Confidence
Non-Cytoplasmic	1	28	0.91
Transmembrane Helix	29	53	0.88
Cytoplasmic	54	186	0.93