YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21555057
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLSVSSSS TIIDSRAPPS RLASASASSP SCISLPTLPI QSHTRAAKAT AYCRKIVRNV  60
   61 VTRATTEVGE APATTTEAET TELPEIVKTA QEAWEKVDDK YAIGSLAFAS VVALWGSAGM 120
  121 ISPIDRLPLV PGVLELVGIG YTGWFTYKNL VFKPDREALF EKVKSTYKDI LGSS

Type	Start	End	Confidence
Cytoplasmic	1	100	0.65
Transmembrane Helix	101	121	0.62
Non-Cytoplasmic	122	128	0.81
Transmembrane Helix	129	147	0.51
Cytoplasmic	148	174	0.50