YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21555036
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERTLLQWRL LPLLALIVAL FSFFFASPRS LQGNNKCSLL PHDHYWISSK RIVTPNGLIS  60
   61 GSVEVKGGII VSVVKEVDWH KSQRSRVKVI DYGEAVLMPG LIDVHVHLDD PGRSEWEGFP 120
  121 SGTKAAAAGG ITTLVDMPLN SFPSTVSPET LKLKIEAAKN RIHVDVGFWG GLVPDNALNS 180
  181 SALESLLDAG VLGLKSFMCP SGINDFPMTN ITHIKEGLSV LAKYKRPLLV HAEIERDLEI 240
  241 EDGSENDPRS YLTYLKTRPT SWEEGAIRNL LSVTENTRIG GSAEGAHLHI VHLSDASSSL 300
  301 DLIKEAKGKG DSVTVETCPH YLAFSAEEIP EGDTRFKCSP PIRDAANREK LWEALMEGDI 360
  361 DMLSSDHSPT KPELKLMSDG NFLKAWGGIS SLQFVLPITW SYGKKYGVTL EQVTSWWSDR 420
  421 PSKLARLHSK GAVTVGKHAD LVVWEPEAEF DVDEDHPIHF KHPSISAYLG RRLSGKVVST 480
  481 FVRGNLVFGE GKHASDACGS LQLATT

Type	Start	End	Confidence
Signal Peptide	1	33	0.86
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	506	0.99