YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21554817
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATVKISLSL ASLSPSSSSS SIQSKLSPSF IPNAAPAKAV KLRFNGKSLR AKPMVYRSSR  60
   61 SVGVTCSASS SLTTLPSALL FDCDGVLVDT EKDGHRISFN DTFKERDLNV TWDVDLYGEL 120
  121 LKIGGGKERM TAYFNKVGWP EKAPKDEAER KEFIAGLHKQ KTELFMVLIE KKLLPLRPGV 180
  181 AKLVDQALTN GVKVAVCSTS NEKAVSAIVS CLLGPERAEK IKIFAGDVVP KKKPDPAIYN 240
  241 LAAETLGVDP SKCVVVEDSA IGLAAAKAAG MTCIVTKSGY TADEDFENAD AVFDCIGDPP 300
  301 EERFDLAFCG SLLQKQFVS

Type	Start	End	Confidence
Signal Peptide	1	20	0.98
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	319	0.99