YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21554639
Protein type:	Globular with Signal Peptide
Type Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFLGRSISK SIRPSLNSTA RKSWVLSSQQ FLSTSSTESS SRTRGGGGGN RAEKSSEEWP  60
   61 RPMEVPYQPK IANSIDLIGY VHQPVQFDST LDGKFWAGTV ISHEPSSDSK SESDSSSNFW 120
  121 IPVLFEGDLA HTANSYLKKN DRVHITGQIL GDVIQSGANS DQAHVQLFKS FHGSFSHQVM 180
  181 VRDLHYIEGS KAMPKVLPTL DQNEGVLKHS ASVQRGREFG TNLWFDLVDK PNEWCDYREM 240
  241 KQNGSVNPKH PDFKMKDGSQ ALWLNNAPTE ILSELKDVKF DIPKYAKQPK AGEESWKDLV 300
  301 DNMNKWWDNR VDKRTPKSPD FKHKETGVGL WLSDSPSWVL EKLPPPKSKT SDIYGVQEMF 360
  361

Type	Start	End	Confidence
Signal Peptide	1	39	0.62
N-region	1	30
H-region	31	36
C-region	37	39
Cleavage Site	39	40
Non-Cytoplasmic	40	360	0.99