YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21554516
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANQKGLHVV MMIITVWLLY AAPNIHGWGK EGHEIICKIA QTRLDETAAK AVKELLPESA  60
   61 EGDLSSLCLW ADRVKFRYHW SSPLHYINTP DACSYQYNRD CKDESGEKGR CVAGAIYNYT 120
  121 TQLLSYKTAA SSQSQYNLTE ALLFVSHFMG DIHQPLHVSY ASDKGGNTIE VHWYTRKANL 180
  181 HHIWDSNIIE TAEADLYNSA LEGMVDALKK NITTEWADQV KRWDTCTKKT ACPDIYASEG 240
  241 IQAACDWAYK GVTEGDTLED EYFYSRLPIV YQRLAQGGVR LAATLNRIFG

Type	Start	End	Confidence
Signal Peptide	1	21	0.70
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	290	0.93