YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21554407
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRVAGTLSA ASSPAVAAAS FSAALRLSIT PTLAIASPPH LRWFSKFSRQ FLGGRISSLR  60
   61 PRIPSPCPIR LSGFPALKMR ASFSSGSSGS SASREILVQH LLVKNDDVEL FAELQKKFLD 120
  121 GEEMSDLAAE YSICPSKKDG GILGWVKLGQ MVPEFEEAAF KAELDQVVRC RTQFGLHLLQ 180
  181 VLSEREPVKD IQVEELHSKM QDPVFMDEAQ LIDVREPNEI EIASLPGFKV FPLRQFGTWA 240
  241 PDITSKLNPE KDTFVLCKVG GRSMQVANWL QSQGFKSVYN ITGGIQAYSL KVDPSIPSY

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	299	0.99