YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	B3GT4_ARATH
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.65
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLKHHHRGL ELSASKSFVS KKWTLFLCIG FFCAGILFSD RMWPEPESNV VSRDTVASDE  60
   61 RLRLESEDCD SSKKGLKRES KDILGDVYKS PDAIQTLDKT ISKLETELAD ARAAQESIMN 120
  121 GSPVSDDFKL PETVTKRKYL MVVGVNTAFS SRKRRDSVRA TWMPPGEERK KLEEEKGIVM 180
  181 RFVIGHSSTP GGILDRAIQA EESKHGDFLR LDHVEGYLEL SAKTKTYFTT AFAMWDADFY 240
  241 VKVDDDVHVN IATLGAELAR YRMKPRVYIG CMKSGPVLAQ KGVRYHEPEY WKFGEEGNKY 300
  301 FRHATGQLYA ISRELASYIS INQNVLHKYV NEDVSLGSWF LGLDVEHVDD RRLCCGTTDC 360
  361 EWKAQAGNIC VASFDWSCSG ICRSADRMKD VHRRCGEGEK ALLAASF

Type	Start	End	Confidence
Cytoplasmic	1	20	0.66
Transmembrane Helix	21	40	0.65
Non-Cytoplasmic	41	407	0.99