YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21553503
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADVENLNSV PASEDTEYGF KRPEMYSTNI ANSITSYARH VFVLYKTPEA WLSHVEEEGL  60
   61 PQRFATLLKD RKSDLLVQTK LNVCEGGGSD GDVLIFPDMI RYKGVKDTDV EGFFEDVLVN 120
  121 GKPWSSGIQE EISGTFVFVC THASRDKRCG VCGPVILERF KQEIGSRGLS DQITLKRCSH 180
  181 VGQHKYAGNL IIFCPDSAGK ITGNWYGYVT PDDVPELLDQ HIAKGEIIQR IWRGQMGLPG 240
  241 GEAEKVHEQK VIPNGNGVVK EESKGFTGGC CQGSNGVSCC QDETPKPEPI KKEVRKCTIW 300
  301 FQPLDKEELY IGAAVVGAIA TIAMAFTFFK RSG

Type	Start	End	Confidence
Non-Cytoplasmic	1	308	0.90
Transmembrane Helix	309	329	0.95
Cytoplasmic	330	333	0.80