YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21553437
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFATHLVV VVVTMLFAAM ASAEMLQDVC VADLSNAVKV NGYTCKDSTQ ITPEDFYFKG  60
   61 LANIAATNTS TGSVVTGANV EKLPGLNTLG LSMSRIDYAP NGLNPPHVHP RASEIIFVLE 120
  121 GQLYVGFVTT AGKLIAKNLN KGDVFTFPKG LIHFQKNIAN SPASVLAAFD SQLPGTQSLV 180
  181 ASLFGALPDD ILAKSFQLKH KQVKKIKLRY APKK

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	214	0.99