YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21436359, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGRAIFSVS CSSTPSLCIP YSTASFSSMN RLALPAVRIS PRTNRFPRIH CSMSANDIKA  60
   61 GTNIEVDGAP WRVLEFLHVK PGKGAAFVRT KIRNYVNGST VERTFRAGIS VEEANIYKET 120
  121 KQFTYKDGSQ FVFMDLTTYE ETRLNESDMG EKTKWLKEGM DCILLYWKDK VIDFDLPITV 180
  181 KLKVVDVDPG LRGDTVQGGS KPATMETGAI VAVPLFINVG EEIFVDTRTG AYMNRA

Type	Start	End	Confidence
Signal Peptide	1	24	0.84
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	236	0.99