YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21554267
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHESITARR RLAAFAAHFP ATSYDSASTA SLVPLNCSSN LNTVIQRCDN KISFARQASS  60
   61 EQGFFMRPAS PDDVLENLGM NLKNTVVRRG DNRLYFARQA SSAQGFFMRQ ASTNERTIPQ 120
  121 DAAASTKFSA TKTTGFDSSS PAYAAPHFSK PAKEDIFFPS LSPNLQKERP KLDLPKLANL 180
  181 GTVWSPRSNV AESTHSYVVA IELPGASIND IRVEVDNTNL TVTGRRTSIC QKVDAGTKAS 240
  241 ILGYHKQEIL QGPFKVSWPL PSNVNKDNVS AEFMDGILRI VIPKL

Type	Start	End	Confidence
Signal Peptide	1	23	0.55
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	285	0.99