YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21554142
Protein type:	Transmembrane
Type Confidence:	0.51
Topology Confidence:	0.30
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLVRGLWRK HRRKILVTTT CLGSGYLLYK LYNAHTRKLA DLERELANER ENDEIIKTQM  60
   61 KAHFDNIQMI ADTTTLPHAI HHLSSRVVEE IDVSSIMDKL SKGKGILIPS EKLQLWNELK 120
  121 ILSFTRMVLS LWSVTMLSLY IRVQVNILGR HLYIDTARGL GSSHLLDELD LIERDDEQKF 180
  181 LTSADFLATS GMPSLISNMQ NAVKEVLKGK QLKDVLTTSA LRETVMRILD VFMSTGSPHH 240
  241 WVDYLMMSQD ATTDVSSSDA TVTKFHLLIT ETREVLASND FSNVAEISLK CCAVALVEEM 300
  301 ETQTGLATGM QLAKLLPQIE KTMPEISAEP EKNRFLQLIR DLPEVKLFFT LLYANMPQ

Type	Start	End	Confidence
Cytoplasmic	1	14	0.46
Transmembrane Helix	15	29	0.30
Non-Cytoplasmic	30	358	0.87