YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21554129
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKTSIPLAA SFLLLISFSS AVDTSRLFLT VVNNCPFTVW PAIQPNAGHP VLEKGGFALP  60
   61 TFTHRSFNVP TTHWSGRIWA RTWCAHYNGK FSCLTGDCGN RLECNGLGGA PPASLAQFDL 120
  121 HHGGHHDFSS YGVSLVDGYN VPMTVTPHEG HGVCPVVGCR EDLIKTCPAH LQVRSHSGHV 180
  181 VACKSGCEAF HTDELCCRGH YNSPNTCKAS SHSLFFKHAC PSSFTFAHDS PSLMHDCASP 240
  241 RELKVIFCH

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	249	0.99